Archaebacteria and Eubacteria Difference
Are archaebacteria and eubacteria different organisms? If so, then how do they differ from each other? Let's find out!

~ Richard Dawkins
True to the quote above, bacteria have probably been around since as early as Earth thought it could support life. As most of us are aware, bacteria are unicellular micro organisms having prokaryotic cellular structures. There is probably no place on Earth where these primordial citizens of our planet cannot be found. Bacteria come in a vast assortment of shapes that include spherical, spiral and rod-like structures. Based upon their ability to retain crystal violet stain, bacteria are broadly classified as gram positive and gram negative bacteria. Although all unicellular prokaryotic life forms are identified as bacteria, there exist a bifurcation, in terms of biological domain, that separates these single-celled prokaryotes into two distinct life forms - Archaebacteria and Eubacteria (or simply bacteria). The details and differences of these two unicellular prokaryotes are the subjects of discussion of this article.
What is Archaebacteria?
The archaebacteria kingdom constitutes both aerobic bacteria as well as anaerobic bacteria. The most significant distinctions that set this domain of unicellular prokaryotes from other bacteria species can be enlisted as two observations:-
- Archaea have been observed to be equipped with metabolic pathways and several units of heredity that are very close in form and function to eukaryotic organisms. Most significant among these aspects are the enzymes possessed and produced by archaea that are involved in genetic translation and transcription.
- Archaea are also known to be dependent upon ether lipids for all functions relating to polar lipids.
What is Eubacteria?
The term Eubacteria is used to denote the generic unicellular prokaryotes that both look like and act as prokaryotes. Almost all types of eubacteria reproduce by undergoing binary fission though some species are known to reproduce by budding. Eubacteria usually derive their nutrition through carbon fixation. There are many different types of bacteria and these include both helpful and harmful types of bacteria. Eubacteria can derive their nutrition from three chief energy sources - sunlight, organic and inorganic compounds.
Difference between Archaebacteria and Eubacteria
The following table shows the basic structural and characteristic differences with relation to archaebacteria vs. eubacteria.
| Points of Distinction | Archaebacteria | Eubacteria |
| RNA Polymerase Composition | Ten subunit core architecture | Four subunit core architecture |
| Pathogenicity | Nil | Some eubacteria are pathogenic (see pathogenic bacteria list) |
| Relationship with Other Organisms | Mutual, commensal | Mutual, predatory, pathogenic |
| Cellular structure | Peptidoglycan absent, ether-liked lipids in the form of branched chains | Peptidoglycan present, ester-linked lipids in the form of a straight chain |
| Role in Nature | Unknown | Significant role in nutrient recycling |
That precisely sums up what Archaebacteria and Eubacteria are along with the most significant points of distinctions that set these two different evolutionary strains of unicellular life-forms apart. Although initially believed to have belonged to the same group of unicellular prokaryotes as Eubacteria, Archaea, as it was later discovered, were identified as a separate group of micro organisms altogether, based upon their rRNA gene sequence. After much research, it was finally concluded that both eubacteria and archaebacteria belong to two separate microbiological domains that descended from a common unicellular ancestor - much the same way as wolves and dogs are believed to have descended from a separate common ancestor.
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